Strong culm: a crucial trait for developing next-generation climate-resilient rice lines 

Pritam Kanti Guha, Nakul D. Magar, Madhavilatha Kommana,Kalyani M. Barbadikar, B. Suneel, C. Gokulan,D. Vijay Lakshmi, Hitendra Kumar Patel,Ramesh V. Sonti, R. M. Sundaram & Maganti Sheshu Madhav

Mapping for yield related traits in rice reveals major effect QTL qFLA1.1 from Oryza nivara increases flag leaf area

Haritha Guttikonda, Gowthami Chandu, Suchandranath Babu Munnam, Kavitha Beerelli, Divya Balakrishnan, R. Madhusudhana & Sarla Neelamraju

Multiomics-assisted characterization of rice-Yellow Stem Borer interaction provides genomic and mechanistic insights into stem borer resistance in rice.

Gokulan, Umakanth Bangale, Vishalakshi Balija,  Suneel Ballichatla, Gopi Potupureddi, Deepti Rao, Prashanth Varma, Nakul Magar, Karteek Jallipalli, Sravan Manthri, A. P. Padmakumari, Gouri S. Laha, L. V. Subba Rao, Kalyani M. Barbadikar, Meenakshi Sundaram Raman, Hitendra K. Patel, Sheshu Madhav Maganti& Ramesh V. Sonti

 

 

Identification of low phosphorus tolerant parental lines of hybrid rice based on stress indices and haplotype analysis using Pup1 linked markers

Madhusudan, R. M. Sundaram, P. Beulah, V. Jaldhani,M. R. Lakshmikanth, M. S. Anantha, P. Revathi,C. Gireesh, R. Gobinath,
H. K. Mahadeva Swamy,A. S. HariPrasad, Mahender Kumar, K. V. Radhakrishna & P. Senguttuvel. 

Dynamics of starch formation and gene expression during grain filling and its possible influence on grain quality

Sanjeeva Rao Durbha, N. Siromani, V. Jaldhani, T. Krishnakanth,Vishnukiran Thuraga, N. Neeraja, D. Subrahmanyam& R. M. Sundaram. 

Mapping QTLs for grain iron, zinc, and yield traits in advanced backcross inbred lines of Samba mahsuri (BPT5204)/Oryza rufpogon 

Gowthami Chandu, Divya Balakrishnan, Suchandranath Babu Munnam, Satendra K. Mangrauthia, Durbha Sanjeeva Rao, C. N. Neeraja, R. M. Sundaram, Sarla Neelamraju

 

Race specifc and non‑specifc resistance to Magnaporthe oryzae and QTL mapping in wild introgression lines using the standard diferential system

Divya Balakrishnan, Yoshimichi Fukuta, Sarla Neelamraju

G×E analysis to Identify the Stable High-yielding Rice Lines among a Set of Selected Germplasm Panel

Padmashree R., Vishal Reddy, Kalyani M. Barbadikar, Honnappa M., Nakul D. Magar, Divya Balakrishnan, C. Gireesh, Anantha M. Siddaiah, Jyothi Badri, R. Lokesha, Y. M. Ramesha, P. Senguttuvel, J. R. Diwan, Maganti Sheshu Madhav and R. M. Sundaram

 

Assessment of reproductive stage drought tolerance using stress indices in improved restorer lines of KMR-3R in rice

Nagaraju, P. Beulah, V. Jaldhani, Y. Manasa, N. Madhusudan, R. M. Sundaram, A. S. Hariprasad, K. Sruthi, M. Sheshu Madhav, Suneetha Kota, M. B. Kalyani, R. Mahender Kumar, B. Sreedevi, H. Surekha Rani, Smita C. Pawar, A. Roja Rani & P. Senguttuvel

 

Screening of Eight Biofortified Rice Varieties Based on Total Content of Zinc and Iron as Well as Its Uptake by Caco-2 Cells: An In Vitro Cellular Model

Sandip Nathani, C. N. Neeraja, R. M. Sundaram and Partha Roy

 

Potential of Exogenous Treatment with Dehydroascorbate to Control Root-knot Nematode Infection in Rice

Satish Namdeo Chavan, Farzana Haque Tumpa, Md. Atiqur Rahman Khokon & Tina Kyndt

 

Gene Expression and Transcriptome Sequencing: Basics, Analysis, Advances

Nakul D. Magar, Priya Shah, K.  Harish, Tejas C. Bosamia, Kalyani M. Barbadikar, Yogesh M. Shukla, Amol Phule, Harshvardhan N. Zala, Maganti Sheshu Madhav, Satendra Kumar Mangrauthia, Chirravuri Naga Neeraja and Raman Meenakshi Sundaram

 

Modeling and Forecasting of Rice Prices in India during the COVID-19 Lockdown Using Machine Learning Approaches.

Santosha Rathod, Gayatri Chitikela, Nirmala Bandumula, Gabrijel Ondrasek , Sundaram Ravichandran and Raman Meenakshi Sundaram

 

An Economic Evaluation of Improved Rice Production Technology in Telangana State, India

Nirmala Bandumula, Santosha Rathod, Gabrijel Ondrasek, Muthuraman Pitchiah Pillai and Raman Meenakshi Sundaram

 

 Gene Expression and Transcriptome Sequencing: Basics, Analysis, Advances

Nakul D. Magar, Priya Shah, K.  Harish, Tejas C. Bosamia, Kalyani M. Barbadikar, Yogesh M. Shukla, Amol Phule, Harshvardhan N. Zala, Maganti Sheshu Madhav, Satendra Kumar Mangrauthia, Chirravuri Naga Neeraja and Raman Meenakshi Sundaram

 

Promising rice genotypes with enhanced root growth and HMA transporter gene expression under zinc deficient conditions

Wilfredo B. Barrera, Jr. Sonali Bej, Suman K, Malathi Surapaneni, R. M. Sundaram and C. N. Neeraja

 

Effect of Nitrogen-fixing Bacteria on Germination, Seedling Vigour and Growth of Two Rice (Oryza sativa L.) Cultivars

Sonth Bandeppa, Amol S. Phule, G. Rajani, K. V. Prasad Babu, Kalyani M. Barbadikar, M. B. B. Prasad Babu, P. K. Mandal, R. M. Sundaram, P. C. Latha 

 

Stacking of Pup1 QTL for low soil phosphorus tolerance and bacterial blight resistance genes in the background of APMS6B, the maintainer line of rice hybrid DRRH-3  

N. Madhusudan, P. Beulah, V. Jaldhani, P. Nagaraju, Y. Manasa, R. M. Sundaram, G. S. Laha, M. S. Anantha, Kalyani M. Barbadikar, C. Gireesh, A. S. HariPrasad,  M. Sheshu Madhav, R. Gobinath, A. Yugandhar, K. B. Kemparaju, C. N. Neeraja, P. Brajendra, M. D. Tuti, R. Mahender Kumar, K. V. Radha Krishna& P. Senguttuvel.

 

Mapping of QTLs for Yield Traits Using F_2:3:4 Populations Derived From Two Alien Introgression Lines Reveals qTGW8.1 as a Consistent QTL for Grain Weight From Oryza nivara

Kavitha Beerelli, Divya Balakrishnan, Krishnam Raju Addanki, Malathi Surapaneni, Venkateswara Rao Yadavalli and Sarla Neelamraju

 

Whole genome sequencing data of native isolates of Bacillus and Trichoderma having potential biocontrol and plant growth promotion activities in rice

C.Kannan, M.Divya, G.Rekha, Kalyani M.Barbadikar, P.Maruthi, S.K.Hajira, R.M.Sundaram

 

Two-Stage Spatiotemporal Time Series Modelling Approach for Rice Yield Prediction & Advanced Agroecosystem Management

Santosha Rathod , Amit Saha, Rahul Patil, Gabrijel Ondrasek,Channappa Gireesh, Madhyavenkatapura Siddaiah Anantha,Dhumannatarao Venkata Krishna Nageswara Rao, Nirmala Bandumula, Ponnuvel Senguttuvel, Arun Kumar Swarnaraj, Shaik N. Meera, Amtul Waris, Ponnuraj Jeyakumar , Brajendra Parmar , Pitchiahpillai Muthuraman and Raman Meenakshi Sundaram.

 

Low GI rice for rice consumers suffering from diabetes mellitus

D. Sanjeeva Rao, R. Ananthan, T. Longvah, J. Aravind Kumar, V. Ravindra Babu and R. M. Sundaram

 

Climate-Based Modeling and Prediction of Rice Gall Midge Populations Using Count Time Series and Machine Learning Approaches 

Santosha Rathod, Sridhar Yerram, Prawin Arya, Gururaj Katti, Jhansi Rani, Ayyagari Phani Padmakumari, Nethi Somasekhar, Chintalapati Padmavathi, Gabrijel Ondrasek, Srinivasan Amudan, Seetalam Malathi, Nalla Mallikarjuna Rao, Kolandhaivelu Karthikeyan, Nemichand Mandawi, Pitchiahpillai Muthuraman and Raman Meenakshi Sundaram

 

Understanding the variability of rice bacterial blight pathogen, Xanthomonas oryzae pv. oryzae in Andhra Pradesh, India

Arra Yugander, Md Ershad, Pitchiah P Muthuraman, Vellaisamy Prakasam, Duraisamy Ladhalakshmi, Maganti Sheshu Madhav, Madamsetty Srinivas Prasad, Raman M Sundaram, Gouri S Laha

 

Mutation resource of Samba Mahsuri revealed the presence of high extent of variations among key traits for rice improvement

Potupureddi G, Balija V, Ballichatla S, C G G, Awalellu K, Lekkala S, Jallipalli K, M G G, Mohammad E, M M, Arutla S, Burka R, Gouri Shankar L, Ayyangari Phani P, Lella Venkata S, Raman Meenakshi S, B C V, Vemuri RB, Brahma K, Madnala R, Patel HK, Sonti RV, Madhav MS

 

Genes for NUE in rice: a way forward for molecular breeding and genome editing

Chirravuri Naga Neeraja, Kalyani M. Barbadikar, Satendra Kumar Mangrauthia, Puskur Raghuveer Rao, Desiraju Subrahmanayam, Raman Meenakshi Sundaram

 

Evaluation of genotype by environment interaction and adaptability in lowland irrigated rice hybrids for grain yield under high temperature

P. Senguttuvel,N. Sravanraju,V. Jaldhani,B. Divya,P. Beulah, P. Nagaraju,Y. Manasa,A. S. Hari Prasad,P. Brajendra, C. Gireesh,M. S. Anantha,K. Suneetha,R. M. Sundaram, M. Sheshu Madhav,, M. D. Tuti,L. V. Subbarao, C. N. Neeraja,V. P. Bhadana,P. R. Rao, S. R. Voleti & D. Subrahmanyam

 

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Novel major QTLs associated with low soil phosphorus tolerance identified from the Indian rice landrace, Wazuhophek

Ravindra Ramrao Kale, Ch. V. Durga rani, M. Anila, H. K. Mahadeva Swamy, V. P. Bhadana, P. Sengutuvel, D. Subrahmanyam, M. Ayyappa Dass, K. Swapnil, M. S. Anantha, E. Punniakotti, B. Laxmi Prasanna, G. Rekha, R. M. Sundaram

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Genome-Wide Expression Profiling of Small RNAs in Indian Strain of Rhizoctonia solani AG1-1A Reveals Differential Regulation of milRNAs during Pathogenesis and Crosstalk of Gene Regulation

Naresh Babu Prathi,Chagamreddy VenkataDurgaRani,Sena Munuswamy Balachandran,Vellaisamy Prakasam,Yeshala Chandra Mohan,Sanivarapu Nagalakshmi,Sunil K. Srivastava,Raman Meenakshi Sundaram &Satendra K. Mangrauthia

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Evaluation of genotype by environment interaction and adaptability in lowland irrigated rice hybrids for grain yield under high temperature

P. Senguttuvel,N. Sravanraju,V. Jaldhani,B. Divya,P. Beulah,P. Nagaraju,Y. Manasa,A. S. Hari Prasad,P. Brajendra, C. Gireesh,M. S. Anantha,K. Suneetha,R. M. Sundaram,M. Sheshu Madhav,, M. D. Tuti,L. V. Subbarao,C. N. Neeraja,V. P. Bhadana,P. R. Rao,S. R. Voleti & D. Subrahmanyam 

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The Draft Genome of Yellow Stem Borer, an Agriculturally Important Pest, Provides Molecular Insights into Its Biology, Development and Specificity Towards Rice for Infestation

Divya Kattupalli, Kalyani M. Barbadikar, Vishalakshi Balaji,Suneel Ballichatla, Athulya, Ayyagari Phani Padmakumari, Swati Saxena, Kishor Gaikwad, Sridhar Yerram, Premalatha Kokku and Maganti Sheshu Madhav

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 PAP90, a novel protein plays a critical role in regulation of D1 protein stability of PSII

M. Raghurami Reddy, Satendra K. Mangrauthia, S. Venkata Reddy, P. Manimaran, Poli Yugandhar, P. Naresh Babu, T. Vishnukiran, D. Subrahmanyam, R. M. Sundaram, S. M. Balachandran

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Grain Fe and Zn content, heterosis, combining ability and its association with grain yield in irrigated and aerobic rice

G.Anusha, D. Sanjeeva Rao, V. Jaldhani, P. Beulah, C. N. Neeraja, C. Gireesh,M. S.Anantha, K. Suneetha, R. Santhosha, A. S. Hari Prasad, R. M. Sundaram,M. Sheshu Madhav, A. Fiyaz, P. Brajendra, M. D.Tuti, M. H.V. Bhave,K.V. Radha Krishna, J.Ali, D. Subrahmanyam & P. Senguttuvel.

 

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Integrated assessment of system of rice intensification vs. conventional method of transplanting for economic benefit, energy efficiency and lower global warming potential in India

B. Nirmala , M. D. Tuti , R. Mahender Kumar , Amtul Waris , P. Muthuraman , Brajendra Parmar & T. Vidhan Singh

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Molecular mapping of QTLs for yield related traits in recombinant inbred line(RIL)population derived from the popular rice hybrid KRH‑2 and their validation through SNP genotyping

Swapnil Ravindra Kulkarni, S. M. Balachandran, K. Ulaganathan, Divya Balakrishnan,M. Praveen,A. S. Hari Prasad, R. A. Fiyaz, P. Senguttuvel, Pragya Sinha,Ravindra R. Kale,G. Rekha, M. B. V. N. Kousik,G. Harika, M. Anila, E.Punniakoti,T. Dilip, S. K. Hajira1, K. Pranathi, M. Ayyappa Das, Mastanbee Shaik, K. Chaitra,P. Koteswara Rao, Sunil S. Gangurde, Manish K. Pandey & R. M. Sundaram.

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Stable SNP Allele Associations With High Grain Zinc Content in Polished Rice (Oryza sativa L.) Identified Based on ddRAD Sequencing

P. Madhu Babu, C. N. Neeraja, Santosha Rathod, K. Suman, G. Anurag Uttam, Navajeet Chakravartty, V. B. Reddy Lachagari, U. Chaitanya, Lella V. Subba Rao and Sitapati Rao Voleti

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A major pleiotropic QTL identified for yield components and nitrogen content in rice (Oryza sativa L.) under differential nitrogen field conditions

T. Vishnukiran, C. N. NeerajaID*, V. JaldhaniID, P. Vijayalakshmi, P. Raghuveer Rao, D. Subrahmanyam, S. R. Voleti

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Mapping QTL hotspots associated with weed competitive traits in backcross population derived from Oryza sativa L. and O. glaberrima Steud.

Muralidhara Bharamappanavara, Anantha M. Siddaiah, Senguttuvel Ponnuvel,Lokesha Ramappa, Basavaraj Patil, ManojAppaiah, Sheshu Madhav Maganti,Raman Meenakshi Sundaram, Shashidhar Kadadanamari Shankarappa, Mangal DeepTuti,Sreedevi Banugu, Brajendra Parmar, Santosha Rathod, Kalyani M. Barbadikar,Suneetha Kota, LellaVenkata Subbarao, Tapan Kumar Mondal & Gireesh Channappa.

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Identification of Promising RILs for High Grain Zinc Through Genotype × Environment Analysis and Stable Grain Zinc QTL Using SSRs and SNPs in Rice (Oryza sativa L.)

K. Suman, C. N. Neeraja, P. Madhubabu, Santosha Rathod, Sonali Bej1, K. P. Jadhav, J. Aravind Kumar, U. Chaitanya, Smita C. Pawar, Surekha H. Rani, Lella V. Subbarao and Sitapati R. Voleti

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Nitrogen Challenges and Opportunities for Agricultural and Environmental Science in India

Andrea Móring, Sunila Hooda, Nandula Raghuram, Tapan Kumar Adhya, Altaf Ahmad, Sanjoy K. Bandyopadhyay, Tina Barsby, Gufran Beig, Alison R. Bentley, Arti Bhatia, Ulrike Dragosits, Julia Drewer, John Foulkes, Sachin D. Ghude, Rajeev Gupta, Niveta Jain, Dinesh Kumar, R. Mahender Kumar, Jagdish K. Ladha, Pranab Kumar Mandal, C. N. Neeraja, Renu Pandey, Himanshu Pathak, Pooja Pawar, Till K. Pellny, Philip Poole, Adam Price, D. L. N. Rao, David S. Reay, N. K. Singh, Subodh Kumar Sinha, Rakesh K. Srivastava, Peter Shewry, Jo Smith, Claudia E. Steadman, Desiraju Subrahmanyam, Kuchi Surekha, Karnam Venkatesh, Varinderpal-Singh, Aimable Uwizeye, Massimo Vieno and Mark A. Sutton